PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.EXV44
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 281aa    MW: 30872.1 Da    PI: 8.7473
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.EXV44genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021215237223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  +Cp Cg  Fs+  +L+ H ++ H
  Aradu.EXV44 215 QCPQCGAKFSSVTTLVDHVQKvH 237
                  7******************9988 PP

2zf-C2H213.20.00027254275323
                  ETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                  Cp+C++ F ++  L+ H  + H
  Aradu.EXV44 254 CPKCSRGFVDPVALVEHVERdH 275
                  *****************99888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510397.843149IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.102.2E-9142IPR000058Zinc finger, AN1-type
SuperFamilySSF1183102.88E-11242No hitNo description
PfamPF014282.0E-13341IPR000058Zinc finger, AN1-type
SMARTSM001540.0022342IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.107.5E-1080141IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.1E-783133No hitNo description
PROSITE profilePS510397.77488137IPR000058Zinc finger, AN1-type
PfamPF014282.1E-791131IPR000058Zinc finger, AN1-type
SMARTSM001540.1591132IPR000058Zinc finger, AN1-type
SMARTSM003550.0064214237IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.951214244IPR007087Zinc finger, C2H2
PfamPF138942.2E-4215237No hitNo description
PROSITE patternPS000280216237IPR007087Zinc finger, C2H2
SMARTSM0035512252275IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.6252280IPR007087Zinc finger, C2H2
PROSITE patternPS000280254275IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
KHCSVSDCKL IDFLPFTCDR CNQIYCLEHR SYIKHNCTKP NKHDVTVVIC PLCAKGVRLI  60
PDQDPNITWE NHVNTECDPS NYEKATKKKK CPAPGCREVL VFSNTIKCRD CMIDHCLKHR  120
FGPAHKCPGP KKLETSFSFM SLVNRNRKEE PKPNLASASS SKWTTGLFNV ASSIMASAEA  180
GISKLSGDTN QSQQTTRNGT GQSSGSGNRN GLVEQCPQCG AKFSSVTTLV DHVQKVHERS  240
GNRPGAKKVT IDACPKCSRG FVDPVALVEH VERDHGGSSR A
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969517.10.0PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like
SwissprotQ8VZ421e-115SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLC6TE011e-166C6TE01_SOYBN; Uncharacterized protein
STRINGGLYMA03G29400.11e-165(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-116C2H2 family protein